FISHFactor: A Probabilistic Factor Model for Spatial Transcriptomics Data with Subcellular Resolution | Walter FC, Stegle O, Velten B. | | | |
Spatial multiomics map of trophoblast development in early pregnancy | Arutyunyan A, Roberts K, Troulé K, Wong FCK, Sheridan MA, Kats I, Garcia-Alonso L, Velten B, Hoo R, Ruiz-Morales ER, Sancho-Serra C, Shilts J, Handfield LF, Marconato L, Tuck E, Gardner L, Mazzeo CI, Li Q, Kelava I, Wright GJ, Prigmore E, Teichmann SA, Bayraktar OA, Moffett A, Stegle O, Turco MY, Vento-Tormo R. | | | |
Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO | Velten B, Braunger JM, Argelaguet R, Arnol D, Wirbel J, Bredikhin D, Zeller G, Stegle O. | | | |
Adaptive penalization in high-dimensional regression and classification with external covariates using variational Bayes | | | | |
MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data | Argelaguet R, Arnol D, Bredikhin D, Deloro Y, Velten B, Marioni JC, Stegle O. | | | |
Gene expression across mammalian organ development | Cardoso-Moreira M, Halbert J, Valloton D, Velten B, Chen C, Shao Y, Liechti A, Ascenção K, Rummel C, Ovchinnikova S, Mazin PV, Xenarios I, Harshman K, Mort M, Cooper DN, Sandi C, Soares MJ, Ferreira PG, Afonso S, Carneiro M, Turner JMA, VandeBerg JL, Fallahshahroudi A, Jensen P, Behr R, Lisgo S, Lindsay S, Khaitovich P, Huber W, Baker J, Anders S, Zhang YE, Kaessmann H. | | | |
Multi-Omics Factor Analysis-a framework for unsupervised integration of multi-omics data sets | Argelaguet R, Velten B, Arnol D, Dietrich S, Zenz T, Marioni JC, Buettner F, Huber W, Stegle O. | | | |
