AG Wittbrodt Veröffentlichungen

2025

• Pakari, Kaisa; Jakab, Sevinç; Sánchez Salvador, Encarnación; Thiel, Christian; Wittbrodt, Joachim; Thumberger, Thomas: Establishing an auxin-inducible GFP nanobody-based acute protein knockdown system to mimic hypomorphic mutations during early medaka embryogenesis / Kaisa Pakari, Sevinç Jakab, Encarnación Sánchez Salvador, Christian Thiel, Joachim Wittbrodt, Thomas… , May 23, 2025. - S.22
  In: bioRxiv beta. (2025) vom: Mai, Artikel-ID 2025.05.23.655727, Seite 1-22
  Online-Ressource, DOI: 10.1101/2025.05.23.655727
• Pöschko, Philipp; Berrou, Caroline M.; Pakari, Kaisa; Ziegler, Michael J.; Kern, Christoph; Koch, Birgit; Wittbrodt, Joachim; Wombacher, Richard: Photoactivatable plant hormone-based chemical inducers of proximity for in vivo applications / Philipp Pöschko, Caroline M. Berrou, Kaisa Pakari, Michael J. Ziegler, Christoph Kern, Birgit Koch, … , January 27, 2025. - S.8 : Illustrationen
  In: ACS chemical biology, ISSN 1554-8937. 20(2025), 2, Seite 332-339
  Online-Ressource, DOI: 10.1021/acschembio.4c00592
• Welz, Bettina; Pierotti, Saul; Fitzgerald, Tomas; Thumberger, Thomas; Suzuki, Risa; Watson, Philip; Fuß, Jana; Cordeiro da Trindade, Tiago; Defranoux, Fanny; Ferreira, Márcio Soares; Naruse, Kiyoshi; Gierten, Jakob; Loosli, Felix; Wittbrodt, Joachim; Birney, Ewan: Discovery and characterisation of gene by environment and epistatic genetic effects in a vertebrate model / Bettina Welz, Saul Pierotti, Tomas Fitzgerald, Thomas Thumberger, Risa Suzuki, Philip Watson, Jana F… , April 26, 2025. - S.43
  In: bioRxiv beta. (2025) vom: Apr., Artikel-ID 2025.04.24.650462, Seite 1-43
  Online-Ressource, DOI: 10.1101/2025.04.24.650462
• Gierten, Jakob; Welz, Bettina; Fitzgerald, Tomas; Thumberger, Thomas; Agarwal, Rashi; Hummel, Oliver; Leger, Adrien; Weber, Philipp; Naruse, Kiyoshi; Hassel, David; Hübner, Norbert; Birney, Ewan; Wittbrodt, Joachim: Natural genetic variation quantitatively regulates heart rate and dimension / Jakob Gierten, Bettina Welz, Tomas Fitzgerald, Thomas Thumberger, Rashi Agarwal, Oliver Hummel, Adri… , 30 April 2025. - S.12 : Illustrationen
  In: Nature Communications, ISSN 2041-1723. 16(2025), Artikel-ID 4062, Seite 1-12
  Online-Ressource, DOI: 10.1038/s41467-025-59425-7

2024

• Kairišs, Kristaps; Sokolova, Natalia; Zilova, Lucie; Schlagheck, Christina; Reinhardt, Robert; Baumbach, Tilo; Faragó, Tomáš; Kamp, Thomas van de; Wittbrodt, Joachim; Weinhardt, Venera: Visualisation of gene expression within the context of tissues using an X-ray computed tomography-based multimodal approach / Kristaps Kairišs, Natalia Sokolova, Lucie Zilova, Christina Schlagheck, Robert Reinhardt, Tilo Baumb… , 12 April 2024. - S.14 : Illustrationen
  In: Scientific reports, ISSN 2045-2322. 14(2024), Artikel-ID 8543, Seite 1-14
  Online-Ressource, DOI: 10.1038/s41598-024-58766-5
• Schütz, Nils; Wittbrodt, Joachim; Moos, Thorsten: (At the) limits of life!? : Ein Bericht zur Marsilius Academy 2023 / Nils Schütz, Jochen Wittbrodt, Thorsten Moos, 2024-03-13. - S.7 : Illustrationen
  In: Forum Marsilius-Kolleg, ISSN 2196-2839. 24(2024), 1, Seite 71-77
  Online-Ressource, DOI: 10.11588/fmk.2024.24.103698
• Suzuki, Risa; Woo, Jia Zheng; Thumberger, Thomas; Hofmann, Gero; Wittbrodt, Joachim; Tavhelidse-Suck, Tinatini: Characterizing medaka visual features using a high-throughput optomotor response assay / Risa Suzuki, Jia Zheng Woo, Thomas Thumberger, Gero Hofmann, Joachim Wittbrodt and Tinatini Tavhelid… , March 31, 2024. - S.26 : Illustrationen
  In: bioRxiv beta. (2024) vom: März, Artikel-ID 2024.03.28.587314, Seite 1-26
  Online-Ressource, DOI: 10.1101/2024.03.28.587314
• Wittbrodt, Joachim: Grenzerfahrungen : biohybride Systeme als Thema partizipativer Wissenschaftsethik / Jochen Wittbrodt, 2024-03-13. - S.5
  In: Forum Marsilius-Kolleg, ISSN 2196-2839. 24(2024), 1, Seite 173-176
  Online-Ressource, DOI: 10.11588/fmk.2024.24.103697
• Afting, Cassian; Mainik, Philipp; Vázquez-Martel, Clara; Abele, Tobias; Kaul, Verena; Kale, Girish; Göpfrich, Kerstin; Lemke, Steffen; Blasco, Eva; Wittbrodt, Joachim: Minimal-invasive 3D laser printing of microimplants in organismo [data] / Cassian Afting, Philipp Mainik, Clara Vázquez-Martel, Tobias Abele, Verena Kaul, Girish Kale, Kersti… . -
  Heidelberg: Universität, 2024-06-13. - 1 Online-Ressource (2 Files)
  Online-Ressource, DOI: 10.11588/data/MVBFOY
• Afting, Cassian; Mainik, Philipp; Vázquez-Martel, Clara; Abele, Tobias; Kaul, Verena; Kale, Girish; Göpfrich, Kerstin; Lemke, Steffen; Blasco, Eva; Wittbrodt, Joachim: Minimal-invasive 3D laser printing of microimplants in organismo / Cassian Afting, Philipp Mainik, Clara Vazquez-Martel, Tobias Abele, Verena Kaul, Girish Kale, Kersti… , August 14, 2024. - S.11 : Illustrationen
  In: Advanced science, ISSN 2198-3844. 11(2024), 30 vom: Aug., Artikel-ID 2401110, Seite 1-11
  Online-Ressource, DOI: 10.1002/advs.202401110
• Walther, Tobias; Afting, Cassian; Drozdowski, Oliver; Schlagheck, Christina; Schwarz, Ulrich S.; Wittbrodt, Joachim; Göpfrich, Kerstin: DNA microbeads for spatio-temporally controlled morphogen release within organoids [research data] / Tobias Walther, Cassian Afting, Oliver M. Drozdowski, Christina Schlagheck, Ulrich S. Schwarz, Joach… . -
  Heidelberg: Universität, 2024-08-30. - 1 Online-Ressource (24 Files)
  Online-Ressource, DOI: 10.11588/data/T87EPK
• Afting, Cassian; Walther, Tobias; Drozdowski, Oliver; Schlagheck, Christina; Schwarz, Ulrich S.; Wittbrodt, Joachim; Göpfrich, Kerstin: DNA microbeads for spatio-temporally controlled morphogen release within organoids / Cassian Afting, Tobias Walther, Oliver M. Drozdowski, Christina Schlagheck, Ulrich S. Schwarz, Joach… , 9 September 2024. - S.16 : Illustrationen
  In: Nature nanotechnology, ISSN 1748-3395. (2024), Seite 1-16
  Online-Ressource, DOI: 10.1038/s41565-024-01779-y
• Ferreira, Márcio Soares; Stricker, Sebastian; Fitzgerald, Tomas; Monahan, Jack; Defranoux, Fanny; Watson, Philip; Welz, Bettina; Hammouda, Omar; Wittbrodt, Joachim; Birney, Ewan: FEHAT : efficient, large scale and automated heartbeat detection in Medaka fish embryos / Marcio Soares Ferreira, Sebastian Stricker, Tomas Fitzgerald, Jack Monahan, Fanny Defranoux, Philip … , December 2024. - S.9 : Illustrationen
  In: Bioinformatics, ISSN 1367-4811. 40(2024), 12 vom: Dez., Artikel-ID btae664, Seite 1-9
  Online-Ressource, DOI: 10.1093/bioinformatics/btae664
• Colombo, Federico; Taale, Mohammadreza; Taheri, Fereydoon; Villiou, Maria; Debatin, Teresa; Dulatahu, Gent; Kollenz, Philipp; Schmidt, Målin; Schlagheck, Christina; Wittbrodt, Joachim; Selhuber-Unkel, Christine: Two-photon laser printing to mechanically stimulate multicellular systems in 3D / Federico Colombo, Mohammadreza Taale, Fereydoon Taheri, Maria Villiou, Teresa Debatin, Gent Dulatahu… , May 10, 2024. - S.13 : Illustrationen
  In: Advanced functional materials, ISSN 1616-3028. 34(2024), 19 vom: Mai, Artikel-ID 2303601, Seite 1-13
  Online-Ressource, DOI: 10.1002/adfm.202303601
• Seleit, Ali; Brettell, Ian; Fitzgerald, Tomas; Vibe, Carina Beatrice; Loosli, Felix; Wittbrodt, Joachim; Naruse, Kiyoshi; Birney, Ewan; Aulehla, Alexander: Modular control of vertebrate axis segmentation in time and space / Ali Seleit, Ian Brettell, Tomas Fitzgerald, Carina Vibe, Felix Loosli, Joachim Wittbrodt, Kiyoshi Na… , September 2024. - S.24 : Illustrationen
  In: The EMBO journal, ISSN 1460-2075. 43(2024), 18 vom: Sept., Seite 4068-4091
  Online-Ressource, DOI: 10.1038/s44318-024-00186-2
• Suzuki, Risa; Woo, Jia Zheng; Thumberger, Thomas; Hofmann, Gero; Wittbrodt, Joachim; Tavhelidse-Suck, Tinatini: Characterizing medaka visual features using a high-throughput optomotor response assay / Risa Suzuki, Jia Zheng Woo, Thomas Thumberger, Gero Hofmann, Joachim Wittbrodt, Tinatini Tavhelidse-… , June 28, 2024. - S.14 : Illustrationen
  In: PLOS ONE, ISSN 1932-6203. 19(2024), 6, Artikel-ID e0302092, Seite 1-14
  Online-Ressource, DOI: 10.1371/journal.pone.0302092

2023

• Pakari, Kaisa; Wittbrodt, Joachim; Thumberger, Thomas: De novo PAM generation to reach initially inaccessible target sites for base editing / Kaisa Pakari, Joachim Wittbrodt, Thomas Thumberger, 2023. - S.7
  In: Development, ISSN 1477-9129. 150(2023), 2, Artikel-ID dev201115, Seite 1-7
  Online-Ressource, DOI: 10.1242/dev.201115
• Sokolova, Natalia; Zilova, Lucie; Wittbrodt, Joachim: Unravelling the link between embryogenesis and adult stem cell potential in the ciliary marginal zone : a comparative study between mammals and teleost fish / Natalia Sokolova, Lucie Zilova, Joachim Wittbrodt, June 2023. - S.9 : Illustrationen
  In: Cells & development, ISSN 2667-2901. 174(2023) vom: Juni, Artikel-ID 203848, Seite 1-9
  Online-Ressource, DOI: 10.1016/j.cdev.2023.203848
• Xu, Ruiyao; Wang, Xianxian; Safi, Sadia; Braunegger, Nico; Hipgrave Ederveen, Agnes; Rottmann, Michelle; Wittbrodt, Joachim; Wuhrer, Manfred; Wesslowski, Janine; Davidson, Gary: N-glycosylation of LRP6 by B3GnT2 promotes Wnt/β-Catenin signalling / Ruiyao Xu, Xianxian Wang, Sadia Safi, Nico Braunegger, Agnes Hipgrave Ederveen, Michelle Rottmann, J… , 10 March 2023. - S.21
  In: Cells, ISSN 2073-4409. 12(2023), 6 vom: März, Artikel-ID 863, Seite 1-21
  Online-Ressource, DOI: 10.3390/cells12060863
• Gierten, Jakob; Welz, Bettina; Fitzgerald, Tomas; Thumberger, Thomas; Hummel, Oliver; Leger, Adrien; Weber, Philipp; Hassel, David; Hübner, Norbert; Birney, Ewan; Wittbrodt, Joachim: Natural genetic variation quantitatively regulates heart rate and dimension / Jakob Gierten, Bettina Welz, Tomas Fitzgerald, Thomas Thumberger, Oliver Hummel, Adrien Leger, Phili… , November 02, 2023. - S.21
  In: bioRxiv beta. (2023), Artikel-ID 2023.09.01.555906, Seite 1-21
  Online-Ressource, DOI: 10.1101/2023.09.01.555906
• Medert, Rebekka; Thumberger, Thomas; Tavhelidse-Suck, Tinatini; Hub, Tobias; Kellner, Tanja; Oguchi, Yoko; Dlugosz, Sascha; Zimmermann, Frank; Wittbrodt, Joachim; Freichel, Marc: Efficient single copy integration via homology-directed repair (scHDR) by 5′modification of large DNA donor fragments in mice / Rebekka Medert, Thomas Thumberger, Tinatini Tavhelidse-Suck, Tobias Hub, Tanja Kellner, Yoko Oguchi,… , 22 February 2023. - S.14 : Illustrationen
  In: Nucleic acids research, ISSN 1362-4962. 51(2023), 3, Artikel-ID e14, Seite 1-14
  Online-Ressource, DOI: 10.1093/nar/gkac1150
• Pakari, Kaisa; Wittbrodt, Joachim; Thumberger, Thomas: CRISPR-Fortschritte : Schnitt für Schnitt zu neuen Möglichkeiten / Kaisa Pakari, Joachim Wittbrodt, Thomas Thumberger, 21 February 2023. - S.4
  In: Biospektrum, ISSN 1868-6249. 29(2023), 1, Seite 25-28
  Online-Ressource, DOI: 10.1007/s12268-023-1893-z
• Doering, Lino; Cornean, Alex; Thumberger, Thomas; Benjaminsen, Jørgen; Wittbrodt, Beate; Kellner, Tanja; Hammouda, Omar T.; Gorenflo, Matthias; Wittbrodt, Joachim; Gierten, Jakob: CRISPR-based knockout and base editing confirm the role of MYRF in heart development and congenital heart disease / Lino Doering, Alex Cornean, Thomas Thumberger, Joergen Benjaminsen, Beate Wittbrodt, Tanja Kellner, … , August 2023. - S.14 : Illustrationen
  In: Disease models & mechanisms, ISSN 1754-8411. 16(2023), 8 vom: Aug., Artikel-ID dmm049811, Seite 1-14
  Online-Ressource, DOI: 10.1242/dmm.049811

2022

• Leger, Adrien; Brettell, Ian; Monahan, Jack; Barton, Carl; Wolf, Nadeshda; Kusminski, Natalja; Herder, Cathrin; Aadepu, Narendar; Becker, Clara; Gierten, Jakob; Hammouda, Omar T.; Hasel, Eva; Lischik, Colin; Lust, Katharina; Sokolova, Natalia; Suzuki, Risa; Tavhelidse-Suck, Tinatini; Thumberger, Thomas; Tsingos, Erika; Watson, Philip; Welz, Bettina; Naruse, Kiyoshi; Loosli, Felix; Wittbrodt, Joachim; Birney, Ewan; Fitzgerald, Tomas: Genomic variations and epigenomic landscape of the medaka inbred Kiyosu-Karlsruhe (MIKK) panel / Adrien Leger, Ian Brettell, Jack Monahan, Carl Barton, Nadeshda Wolf, Natalja Kusminski, Cathrin Her… , 21 February 2022. - S.24
  In: Genome biology, ISSN 1474-760X. 23(2022), Artikel-ID 58, Seite 1-24
  Online-Ressource, DOI: 10.1186/s13059-022-02602-4
• Aghaallaei, Nargessadat; Agarwal, Rashi; Benjaminsen, Jørgen; Lust, Katharina; Bajoghli, Baubak; Wittbrodt, Joachim; Feijoo, Carmen G.: Antigen-presenting cells and T cells interact in a specific area of the intestinal mucosa defined by the Ccl25-Ccr9 axis in medaka / Narges Aghaallaei, Rashi Agarwal, Joergen Benjaminsen, Katharina Lust, Baubak Bajoghli, Joachim Witt… , 03 February 2022. - S.11
  In: Frontiers in immunology, ISSN 1664-3224. 13(2022), Artikel-ID 812899, Seite 1-11
  Online-Ressource, DOI: 10.3389/fimmu.2022.812899
• Cornean, Alex; Gierten, Jakob; Welz, Bettina; Mateo, Juan L.; Thumberger, Thomas; Wittbrodt, Joachim: Precise in vivo functional analysis of DNA variants with base editing using ACEofBASEs target prediction / Alex Cornean, Jakob Gierten, Bettina Welz, Juan Luis Mateo, Thomas Thumberger, Joachim Wittbrodt, 04 April 2022. - S.34
  In: eLife, ISSN 2050-084X. 11(2022), Artikel-ID e72124, Seite 1-34
  Online-Ressource, DOI: 10.7554/eLife.72124
• Thumberger, Thomas; Tavhelidse-Suck, Tinatini; Gutiérrez Triana, José Arturo; Cornean, Alex; Medert, Rebekka; Welz, Bettina; Freichel, Marc; Wittbrodt, Joachim: Boosting targeted genome editing using the hei-tag / Thomas Thumberger, Tinatini Tavhelidse-Suck, Jose Arturo Gutierrez-Triana, Alex Cornean, Rebekka Med… , Mar 25, 2022. - S.16 : Illustrationen
  In: eLife, ISSN 2050-084X. 11(2022), Artikel-ID e70558, Seite 1-16
  Online-Ressource, DOI: 10.7554/eLife.70558
• Beedgen, Lars; Hüllen, Andreas; Jakab, Sevinç; Thumberger, Thomas; Wittbrodt, Joachim; Thiel, Christian: A rapid and simple procedure for the isolation and cultivation of fibroblast-like cells from medaka and zebrafish embryos and fin clip biopsies / Lars Beedgen, Andreas Hüllen, Sevinç Gücüm, Thomas Thumberger, Jochen Wittbrodt, Christian Thiel. -
  London ; Heidelberg: Sage Publications ; Universitätsbibliothek Heidelberg, 21 Jun. 2022. - 1 Online-Ressource (9 Seiten)
  Online-Ressource, DOI: 10.11588/heidok.00031793
• Fitzgerald, Tomas; Brettell, Ian; Leger, Adrien; Wolf, Nadeshda; Kusminski, Natalja; Monahan, Jack; Barton, Carl; Herder, Cathrin; Aadepu, Narendar; Gierten, Jakob; Becker, Clara; Hammouda, Omar; Hasel, Eva Mareike; Lischik, Colin Q.; Lust, Katharina; Sokolova, Natalia; Suzuki, Risa; Tsingos, Erika; Tavhelidse-Suck, Tinatini; Thumberger, Thomas; Watson, Philip; Welz, Bettina; Khouja, Nadia; Naruse, Kiyoshi; Birney, Ewan; Wittbrodt, Joachim; Loosli, Felix: The Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel / Tomas Fitzgerald, Ian Brettell, Adrien Leger, Nadeshda Wolf, Natalja Kusminski, Jack Monahan, Carl B… , 21 February 2022. - S.32
  In: Genome biology, ISSN 1474-760X. 23(2022), Artikel-ID 59, Seite 1-32
  Online-Ressource, DOI: 10.1186/s13059-022-02623-z
• Pakari, Kaisa; Wittbrodt, Joachim; Thumberger, Thomas: The inceptionist’s guide to base editing : de novo PAM generation to reach initially inaccessible target-sites / Kaisa Pakari, Joachim Wittbrodt, Thomas Thumberger, July 07, 2022. - S.18
  In: bioRxiv beta. (2022) vom: Juli, Artikel-ID 2022.07.07.499158, Seite 1-18
  Online-Ressource, DOI: 10.1101/2022.07.07.499158
• 3D-Druck : neue Materialien, neue Möglichkeiten / Larissa Vassilian, Prof. Jochen Wittbrodt, Prof. Peter Gumbsch, Christina Schlagheck. -
  [München]: Larissa Vassilian, 15. Mai 2022. - 1 Online-Ressource (28:50 min)
  (Exzellent erklärt / Larissa Vassilian)
  Online-Ressource

2021

• Cirksena, Karsten; Hutte, Hermann J.; Shcherbakova, Aleksandra; Thumberger, Thomas; Sakson, Roman; Weiss, Stefan; Jensen, Lars Riff; Friedrich, Alina; Todt, Daniel; Kuss, Andreas W.; Ruppert, Thomas; Wittbrodt, Joachim; Bakker, Hans; Buettner, Falk F. R.: The C-mannosylome of human induced pluripotent stem cells implies a role for ADAMTS16 C-pannosylation in eye development / Karsten Cirksena, Hermann J. Hutte, Aleksandra Shcherbakova, Thomas Thumberger, Roman Sakson, Stefan… , May 8, 2021. - S.14
  In: Molecular & cellular proteomics, ISSN 1535-9484. 20(2021), Artikel-ID 100092, Seite 1-14
  Online-Ressource, DOI: 10.1016/j.mcpro.2021.100092
• Kohärente, dosiseffiziente Röntgenbildgebung von biologischen Modellorganismen : Schlussbericht : Verbund: 05K2016 "CODE-VITA"$dZuwendungsempfänger: Centre for Organismal Studies (COS), Universität Heidelberg ; Projektleitung: Prof. Dr. Joachim Wittbrodt ; zusätzlicher Name: Frederike Seibold. -
  [Heidelberg]: Universität Heidelberg, 20.08.2021. - 13, 4 Blätter : Illustrationen
• Becker, Clara; Lust, Katharina; Wittbrodt, Joachim: Igf signaling couples retina growth with body growth by modulating progenitor cell division / Clara Becker, Katharina Lust and Joachim Wittbrodt, 15 April 2021. - S.13
  In: Development, ISSN 1477-9129. 148(2021), 7, Artikel-ID dev199133, Seite 1-13
  Online-Ressource, DOI: 10.1242/dev.199133
• Jakab, Sevinç; Sakson, Roman; Hoffmann, Marcus; Grote, Valerian; Becker, Clara; Pakari, Kaisa; Beedgen, Lars; Thiel, Christian; Rapp, Erdmann; Ruppert, Thomas; Thumberger, Thomas; Wittbrodt, Joachim: A patient-based medaka alg2 mutant as a model for hypo-N-glycosylation / Sevinç Gücüm, Roman Sakson, Marcus Hoffmann, Valerian Grote, Clara Becker, Kaisa Pakari, Lars Beedge… , 09 June 2021. - S.16
  In: Development, ISSN 1477-9129. 148(2021), 11, Artikel-ID dev.199385, Seite 1-16
  Online-Ressource, DOI: 10.1242/dev.199385
• Wagner, Nils; Beuttenmueller, Fynn; Norlin, Nils; Gierten, Jakob; Boffi, Juan Carlos; Wittbrodt, Joachim; Weigert, Martin; Hufnagel, Lars; Prevedel, Robert; Kreshuk, Anna: Deep learning-enhanced light-field imaging with continuous validation / Nils Wagner, Fynn Beuttenmueller, Nils Norlin, Jakob Gierten, Juan Carlos Boffi, Joachim Wittbrodt, … , 7 May 2021. - S.7
  In: Nature methods, ISSN 1548-7105. 18(2021), 5, Seite 557-563
  Online-Ressource, DOI: 10.1038/s41592-021-01136-0
• Zilova, Lucie; Weinhardt, Venera; Tavhelidse-Suck, Tinatini; Schlagheck, Christina; Thumberger, Thomas; Wittbrodt, Joachim: Fish primary embryonic pluripotent cells assemble into retinal tissue mirroring in vivo early eye development - in vivo imaging of OV formation / Lucie Zilova, Venera Weinhardt, Tinatini Tavhelidse, Christina Schlagheck, Thomas Thumberger, Joachi… . -
  Heidelberg: Universität, 2021-07-06. - 1 Online-Ressource (12 Files)
  Online-Ressource, DOI: 10.11588/data/AOSUS8
• Hammouda, Omar; Wu, Meng Yue; Kaul, Verena; Gierten, Jakob; Thumberger, Thomas; Wittbrodt, Joachim: In vivo identification and validation of novel potential predictors for human cardiovascular diseases / Omar T. Hammouda, Meng Yue Wu, Verena Kaul, Jakob Gierten, Thomas Thumberger, Joachim Wittbrodt, December 17, 2021. - S.20
  In: PLOS ONE, ISSN 1932-6203. 16(2021), 12, Artikel-ID e0261572, Seite 1-20
  Online-Ressource, DOI: 10.1371/journal.pone.0261572
• Zilova, Lucie; Weinhardt, Venera; Tavhelidse-Suck, Tinatini; Schlagheck, Christina; Thumberger, Thomas; Wittbrodt, Joachim: Fish primary embryonic pluripotent cells assemble into retinal tissue mirroring in vivo early eye development / Lucie Zilova, Venera Weinhardt, Tinatini Tavhelidse, Christina Schlagheck, Thomas Thumberger, Joachi… , 12 July 2021. - S.26
  In: eLife, ISSN 2050-084X. 10(2021), Artikel-ID e66998, Seite 1-26
  Online-Ressource, DOI: 10.7554/eLife.66998
• Aghaallaei, Nargessadat; Dick, Advaita M.; Tsingos, Erika; Inoue, Daigo; Hasel, Eva Mareike; Thumberger, Thomas; Toyoda, Atsushi; Leptin, Maria; Wittbrodt, Joachim; Bajoghli, Baubak: αβ/γδ T cell lineage outcome is regulated by intrathymic cell localization and environmental signals / Narges Aghaallaei, Advaita M. Dick, Erika Tsingos, Daigo Inoue, Eva Hasel, Thomas Thumberger, Atsush… , 14 July 2021. - S.13
  In: Science advances, ISSN 2375-2548. 7(2021), 29, Artikel-ID eabg3613, Seite 1-13
  Online-Ressource, DOI: 10.1126/sciadv.abg3613
• Kohärente, dosiseffiziente Röntgenbildgebung von biologischen Modellorganismen : Schlussbericht : Verbund: 05K2016 "CODE-VITA"$dZuwendungsempfänger: Centre for Organismal Studies (COS), Universität Heidelberg ; Projektleitung: Prof. Dr. Joachim Wittbrodt ; zusätzlicher Name: Frederike Seibold. -
  [Heidelberg]: Universität Heidelberg, 20.08.2021. - 1 Online-Ressource (18 Seiten, 3,96 MB) : Illustrationen
  Online-Ressource, DOI: 10.2314/KXP:1826639292
• Medert, Rebekka; Thumberger, Thomas; Tavhelidse-Suck, Tinatini; Hub, Tobias; Kellner, Tanja; Oguchi, Yoko; Dlugosz, Sascha; Zimmermann, Frank; Wittbrodt, Joachim; Freichel, Marc: Efficient single copy integration via homology-directed repair (scHDR) by 5’modification of large DNA donor fragments in mice / Rebekka Medert, Thomas Thumberger, Tinatini Tavhelidse, Tobias Hub, Tanja Kellner, Yoko Oguchi, Sasc… , September 30, 2021. - S.37 : Illustrationen
  In: bioRxiv beta. (2021) vom: Sept., Artikel-ID 2021.09.30.462539, Seite 1-37
  Online-Ressource, DOI: 10.1101/2021.09.30.462539
• Fitzgerald, Tomas; Brettell, Ian; Leger, Adrien; Wolf, Nadeshda; Kusminski, Natalja; Monahan, Jack; Barton, Carl; Herder, Cathrin; Aadepu, Narendar; Gierten, Jakob; Becker, Clara; Hammouda, Omar; Hasel, Eva Mareike; Lischik, Colin Q.; Lust, Katharina; Suzuki, Risa; Tsingos, Erika; Tavhelidse-Suck, Tinatini; Thumberger, Thomas; Watson, Philip; Welz, Bettina; Khouja, Nadia; Naruse, Kiyoshi; Birney, Ewan; Wittbrodt, Joachim; Loosli, Felix: The Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel / Tomas Fitzgerald, Ian Brettell, Adrien Leger, Nadeshda Wolf, Natalja Kusminski, Jack Monahan, Carl B… , May 21, 2021. - S.34
  In: bioRxiv beta. (2021) vom: Mai, Artikel-ID 2021.05.17.444412, Seite 1-34
  Online-Ressource, DOI: 10.1101/2021.05.17.444412
• Thumberger, Thomas; Tavhelidse-Suck, Tinatini; Gutiérrez Triana, José Arturo; Medert, Rebekka; Cornean, Alex; Welz, Bettina; Freichel, Marc; Wittbrodt, Joachim: Hei-tag: a highly efficient tag to boost targeted genome editing / Thomas Thumberger, Tinatini Tavhelidse, Jose Arturo Gutierrez-Triana, Rebekka Medert, Alex Cornean, … , June 10, 2021. - S.19 : Illustrationen
  In: bioRxiv beta. (2021) vom: Juni, Artikel-ID 2021.05.27.445956, Seite 1-19
  Online-Ressource, DOI: 10.1101/2021.05.27.445956
• Hammouda, Omar; Wu, Meng Yue; Kaul, Verena; Gierten, Jakob; Thumberger, Thomas; Wittbrodt, Joachim: In vivo identification and validation of novel potential predictors for human cardiovascular diseases / Omar T. Hammouda, Meng Yue Wu, Verena Kaul, Jakob Gierten, Thomas Thumberger and Joachim Wittbrodt, June 21, 2021. - S.42 : Illustrationen
  In: bioRxiv beta. (2021) vom: Juni, Artikel-ID 2021.02.03.429563, Seite 1-42
  Online-Ressource, DOI: 10.1101/2021.02.03.429563
• Cornean, Alex; Gierten, Jakob; Welz, Bettina; Mateo, Juan L.; Thumberger, Thomas; Wittbrodt, Joachim: Precise in vivo functional analysis of DNA variants with base editing using ACEofBASEs target prediction / authors: Alex Cornean, Jakob Gierten, Bettina Welz, Juan L. Mateo, Thomas Thumberger, Joachim Wittbr… , July 26, 2021. - S.63 : Illustrationen
  In: bioRxiv beta. (2021) vom: Juli, Artikel-ID 2021.07.26.453883, Seite 1-63
  Online-Ressource, DOI: 10.1101/2021.07.26.453883

2020

• Gierten, Jakob; Pylatiuk, Christian; Hammouda, Omar; Schock, Christian; Stegmaier, Johannes; Wittbrodt, Joachim; Gehrig, Jochen; Loosli, Felix: Automated high-throughput heartbeat quantification in medaka and zebrafish embryos under physiological conditions / Jakob Gierten, Christian Pylatiuk, Omar T. Hammouda, Christian Schock, Johannes Stegmaier, Joachim W… , 06 February 2020. - S.12
  In: Scientific reports, ISSN 2045-2322. 10(2020) Artikel-Nummer 2046, 12 Seiten
  Online-Ressource, DOI: 10.1038/s41598-020-58563-w
• Lösel, Philipp; Kamp, Thomas van de; Jayme, Alejandra; Ershov, Alexey; Faragó, Tomáš; Pichler, Olaf; Tan Jerome, Nicholas; Aadepu, Narendar; Bremer, Sabine; Chilingaryan, Suren; Heethoff, Michael; Kopmann, Andreas; Odar, Janes; Schmelzle, Sebastian; Zuber, Marcus; Wittbrodt, Joachim; Baumbach, Tilo; Heuveline, Vincent: Introducing Biomedisa as an open-source online platform for biomedical image segmentation / Philipp D. Lösel, Thomas van de Kamp, Alejandra Jayme, Alexey Ershov, Tomáš Faragó, Olaf Pichler, Ni… , 04 November 2020. - S.14
  In: Nature Communications, ISSN 2041-1723. 11(2020), Artikel-ID 5577, Seite 1-14
  Online-Ressource, DOI: 10.1038/s41467-020-19303-w
• Meyer, Hannah V.; Dawes, Timothy J. W.; Serrani, Marta; Bai, Wenjia; Tokarczuk, Paweł; Cai, Jiashen; de Marvao, Antonio; Henry, Albert; Lumbers, R. Thomas; Gierten, Jakob; Thumberger, Thomas; Wittbrodt, Joachim; Ware, James S.; Rueckert, Daniel; Matthews, Paul M.; Prasad, Sanjay K.; Costantino, Maria L.; Cook, Stuart A.; Birney, Ewan; O’Regan, Declan P.: Genetic and functional insights into the fractal structure of the heart / Hannah V. Meyer, Timothy J.W. Dawes, Marta Serrani, Wenjia Bai, Paweł Tokarczuk, Jiashen Cai, Antoni… , 19 August 2020. - S.6
  In: Nature, ISSN 1476-4687. 584(2020), 7822, Seite 589-594
  Online-Ressource, DOI: 10.1038/s41586-020-2635-8
• Jakab, Sevinç; Sakson, Roman; Hoffmann, Marcus; Grote, Valerian; Beedgen, Lars; Thiel, Christian; Rapp, Erdmann; Ruppert, Thomas; Wittbrodt, Joachim; Thumberger, Thomas: The medaka alg2 mutant is a model for hypo-N-glycosylation-associated retinitis pigmentosa / Sevinç Gücüm, Roman Sakson, Marcus Hoffmann, Valerian Grote, Lars Beedgen, Christian Thiel, Erdmann … , August 24, 2020. - S.40
  In: bioRxiv beta. (2020) vom: Aug., Artikel-ID 2020.08.20.260430, Seite 1-40
  Online-Ressource, DOI: 10.1101/2020.08.20.260430
• Bosze, Bernadett; Ono, Yosuke; Mattes, Benjamin; Sinner, Claude; Gourain, Victor; Thumberger, Thomas; Tlili, Sham; Wittbrodt, Joachim; Saunders, Timothy E.; Strähle, Uwe; Schug, Alexander; Scholpp, Steffen: Pcdh18a regulates endocytosis of E-cadherin during axial mesoderm development in zebrafish / Bernadett Bosze, Yosuke Ono, Benjamin Mattes, Claude Sinner, Victor Gourain, Thomas Thumberger, Sham… , 01 June 2020. - S.18
  In: Histochemistry and cell biology, ISSN 1432-119X. 154(2020), 5, Seite 463-480
  Online-Ressource, DOI: 10.1007/s00418-020-01887-5

2019

• Dasyani, Manish; Centanin, Lázaro; Wittbrodt, Joachim: Lineage tracing of col10a1 cells identifies distinct progenitor populations for osteoblasts and joint cells in the regenerating fin of medaka (Oryzias latipes) / Manish Dasyani, Wen Hui Tan, Sudha Sundaram, Nurgul Imangali, Lazaro Centanin, Joachim Wittbrodt, Ch… , 17 July 2019. - S.15
  In: Developmental biology, ISSN 1095-564X. 455(2019), 1, Seite 85-99
  Online-Ressource, DOI: 10.1016/j.ydbio.2019.07.012
• Gierten, Jakob; Pylatiuk, Christian; Hammouda, Omar; Schock, Christian; Stegmaier, Johannes; Wittbrodt, Joachim; Gehrig, Jochen; Loosli, Felix: Automated high-throughput heart rate measurement in medaka and zebrafish embryos under physiological conditions / Jakob Gierten, Christian Pylatiuk, Omar Hammouda, Christian Schock, Johannes Stegmaier, Joachim Witt… . -
  Karlsruhe, [2019]. - 1 Online-Ressource (39 Seiten)
  Online-Ressource, DOI: 10.1101/548594
• Vázquez-Marín, Javier; Gutiérrez Triana, José Arturo; Almuedo-Castillo, María; Buono, Lorena; Gómez-Skarmeta, José Luis; Mateo, Juan L.; Wittbrodt, Joachim; Martínez-Morales, Juan Ramón: yap1b, a divergent Yap/Taz family member, cooperates with yap1 in survival and morphogenesis via common transcriptional targets / Javier Vázquez-Marín, José Arturo Gutiérrez-Triana, María Almuedo-Castillo, Lorena Buono, José Luis … , 21 June 2019. - S.15
  In: Development, ISSN 1477-9129. 146(2019), 13
  Online-Ressource, DOI: 10.1242/dev.173286
• Lischik, Colin Q.; Adelmann, Leonie; Wittbrodt, Joachim: Enhanced in vivo-imaging in medaka by optimized anaesthesia, fluorescent protein selection and removal of pigmentation / Colin Q. Lischik, Leonie Adelmann, Joachim Wittbrodt, March 7, 2019. - S.19
  In: PLOS ONE, ISSN 1932-6203. 14(2019,3) Artikel-Nummer e0212956, 19 Seiten
  Online-Ressource, DOI: 10.1371/journal.pone.0212956
• Hammouda, Omar; Böttger, Frank; Wittbrodt, Joachim; Thumberger, Thomas: Swift large-scale examination of directed genome editing / Omar T. Hammouda, Frank Böttger, Joachim Wittbrodt, Thomas Thumberger, March 5, 2019. - S.11
  In: PLOS ONE, ISSN 1932-6203. 14(2019), 3, Artikel-ID e0213317, Seite 1-11
  Online-Ressource, DOI: 10.1371/journal.pone.0213317
• Wagner, Nils; Gierten, Jakob; Wittbrodt, Joachim: Instantaneous isotropic volumetric imaging of fast biological processes / Nils Wagner, Nils Norlin, Jakob Gierten, Gustavo de Medeiros, Bálint Balázs, Joachim Wittbrodt, Lars… , 29 April 2019. - S.4
  In: Nature methods, ISSN 1548-7105. 16(2019), 6, Seite 497-200
  Online-Ressource, DOI: 10.1038/s41592-019-0393-z
• Kikuchi, Mariko; Gutiérrez Triana, José Arturo; Mateo, Juan L.; Wittbrodt, Joachim: Novel components of germline sex determination acting downstream of foxl3 in medaka / Mariko Kikuchi, Toshiya Nishimura, Daisuke Saito, Shuji Shigenobu, Ritsuko Takada, José Arturo Gutie… , 2019. - S.10
  In: Developmental biology, ISSN 1095-564X. 445(2019), 1, Seite 80-89
  Online-Ressource, DOI: 10.1016/j.ydbio.2018.10.019
• Tsingos, Erika; Höckendorf, Burkhard; Sütterlin, Thomas; Kirchmaier, Stephan; Grabe, Niels; Centanin, Lázaro; Wittbrodt, Joachim: Retinal stem cells modulate proliferative parameters to coordinate post-embryonic morphogenesis in the eye of fish / Erika Tsingos, Burkhard Höckendorf, Thomas Sütterlin, Stephan Kirchmaier, Niels Grabe, Lazaro Centan… , Mar 26, 2019. - S.38
  In: eLife, ISSN 2050-084X. 8(2019) Artikel-Nummer e42646, 38 Seiten
  Online-Ressource, DOI: 10.7554/eLife.42646

2018

• Goodbye USA - welcome Germany : Forschung in Deutschland / Joachim Wittbrodt. -
  Heidelberg: Universitätsbibliothek Heidelberg, 24 Mai 2018. - 1 Online-Ressource
  (Campus-Report bei Uni-Radio Baden)
  Online-Ressource
• Gutiérrez Triana, José Arturo; Tavhelidse-Suck, Tinatini; Thumberger, Thomas; Thomas, Isabelle; Wittbrodt, Beate; Kellner, Tanja; Anlas, Kerim; Tsingos, Erika; Wittbrodt, Joachim: Efficient single-copy HDR by 5' modified long dsDNA donors / Jose Arturo Gutierrez-Triana, Tinatini Tavhelidse, Thomas Thumberger, Isabelle Thomas, Beate Wittbro… , Aug 29, 2018
  In: eLife, ISSN 2050-084X. 7(2018) Artikel-Nummer e39468, 41 Seiten
  Online-Ressource, DOI: 10.7554/eLife.39468
• Berechtigung der Grundlagenforschung / Joachim Wittbrodt. -
  Heidelberg: Universitätsbibliothek Heidelberg, 27 Apr. 2018. - 1 Online-Ressource
  (Campus-Report bei Uni-Radio Baden)
  Online-Ressource, DOI: 10.11588/heidok.00024418
• Roussigné, Myriam; Tsingos, Erika; Kuchling, Franz; Wittbrodt, Joachim; Carl, Matthias: Left/right asymmetric collective migration of parapineal cells is mediated by focal FGF signaling activity in leading cells / Myriam Roussigné, Lu Wei, Erika Tsingos, Franz Kuchling, Mansour Alkobtawi, Matina Tsalavouta, Joach… , October 3, 2018. - S.10
  In: Proceedings of the National Academy of Sciences of the United States of America, ISSN 1091-6490. 115(2018), 42, Seite E9812-E9821
  Online-Ressource, DOI: 10.1073/pnas.1812016115
• Pérez Saturnino, Alicia; Lust, Katharina; Wittbrodt, Joachim: Notch signalling patterns retinal composition by regulating atoh7 during post-embryonic growth / Alicia Pérez Saturnino, Katharina Lust and Joachim Wittbrodt, 9 November 2018
  In: Development, ISSN 1477-9129. 145(2018,21) Artikel-Nummer dev169698, 11 Seiten
  Online-Ressource, DOI: 10.1242/dev.169698
• Weinhardt, Venera; Wernet, Tobias; Wittbrodt, Joachim: Quantitative morphometric analysis of adult teleost fish by X-ray computed tomography / Venera Weinhardt, Roman Shkarin, Tobias Wernet, Joachim Wittbrodt, Tilo Baumbach & Felix Loosli, 08 November 2018. - S.12
  In: Scientific reports, ISSN 2045-2322. 8(2018) Artikel-Nummer 16531, 12 Seiten
  Online-Ressource, DOI: 10.1038/s41598-018-34848-z
• Lust, Katharina; Wittbrodt, Joachim: Activating the regenerative potential of Müller glia cells in a regeneration-deficient retina / Katharina Lust, Joachim Wittbrodt, Jan 29, 2018
  In: eLife, ISSN 2050-084X. 7(2018) Artikel-Nummer e32319
  Online-Ressource, DOI: 10.7554/eLife.32319
• Inoue, Daigo; Wittbrodt, Joachim; Gruss, Oliver: Loss and rebirth of the animal microtubule organizing center : how maternal expression of centrosomal proteins cooperates with the sperm centriole in zygotic centrosome reformation / Daigo Inoue, Joachim Wittbrodt, Oliver J. Gruss, 09 March 2018. - S.9
  In: Bioessays, ISSN 1521-1878. 40(2018,4) Artikel-Nummer p1700135, 9 Seiten
  Online-Ressource, DOI: 10.1002/bies.201700135
• Bosze, Bernadett; Mattes, Benjamin; Sinner, Claude; Stricker, Kathrin; Gourain, Victor Philippe Marie; Thumberger, Thomas; Tlili, Sham; Weber, Sabrina; Wittbrodt, Joachim; Saunders, Timothy E.; Strähle, Uwe; Schug, Alexander; Scholpp, Steffen: Pcdh18a-positive tip cells instruct notochord formation in zebrafish / Bernadett Bosze, Benjamin Mattes, Claude Sinner, Kathrin Stricker, Victor Gourain, Thomas Thumberger… , January 31, 2018. - S.47 : Illustrationen
  In: bioRxiv beta. (2018) vom: Jan., Artikel-ID 257717, Seite 1-47
  Online-Ressource, DOI: 10.1101/257717

2017

• Shi, Dongbo; Tavhelidse-Suck, Tinatini; Thumberger, Thomas; Wittbrodt, Joachim; Greb, Thomas: Bifacial stem cell niches in fish and plants / Dongbo Shi, Tinatini Tavhelidse, Thomas Thumberger, Joachim Wittbrodt and Thomas Greb, 24 February 2017. - S.6
  In: Current opinion in genetics & development, ISSN 1879-0380. 45(2017), Seite 28-33
  Online-Ressource, DOI: 10.1016/j.gde.2017.02.002
• Kuri Rodríguez, Paola Sofía; Thumberger, Thomas; Wittbrodt, Joachim: Dynamics of in vivo ASC speck formation / Paola Kuri, Nicole L. Schieber, Thomas Thumberger, Joachim Wittbrodt, Yannick Schwab, and Maria Lept… , 12 July 2017. - S.19
  In: The journal of cell biology, ISSN 1540-8140. 216(2017), 9, Seite 2891-2909
  Online-Ressource, DOI: 10.1083/jcb.201703103
• Kirchmaier, Stephan; Lust, Katharina; Wittbrodt, Joachim: Generation of DNA constructs using the golden GATEway cloning method / Stephan Kirchmaier, Katharina Lust, Jochen Wittbrodt, 2017. - S.12
  In: Synthetic DNA. (2017), Seite 157-168
  Online-Ressource, DOI: 10.1007/978-1-4939-6343-0_12
• Pereiro, Luisa; Wittbrodt, Joachim: Gastrulation in an annual killifish : molecular and cellular events during germ layer formation in Austrolebias / Luisa Pereiro, Felix Loosli, Juan Fernández, Steffen Härtel, Joachim Wittbrodt and Miguel L. Concha, 1 March 2017. - S.15
  In: Developmental dynamics, ISSN 1097-0177. 246(2017), 11, Seite 812-826
  Online-Ressource, DOI: 10.1002/dvdy.24496
• Inoue, Daigo; Stemmer, Manuel; Thumberger, Thomas; Ruppert, Thomas; Bärenz, Felix; Wittbrodt, Joachim; Gruss, Oliver: Expression of the novel maternal centrosome assembly factor Wdr8 is required for vertebrate embryonic mitoses / Daigo Inoue, Manuel Stemmer, Thomas Thumberger, Thomas Ruppert, Felix Bärenz, Joachim Wittbrodt, and… , 18 Jan 2017. - S.12
  In: Nature Communications, ISSN 2041-1723. 8(2017), Artikel-ID 14090
  Online-Ressource, DOI: 10.1038/ncomms14090

2016

• "Implementation of X-ray hierarchical imaging for life sciences: application to functional genomics and regenerative biology" : final report / Institution: Dept. of Molecular Developmental Biology and Physiology, Centre for Organismal Studies,… . -
  Heidelberg: Dept. of Molecular Developmental Biology and Physiology, Centre for Organismal Studies, Heidelberg University, 08.08.2016. - 20 Seiten : Illustrationen, Diagramme
• Friedrich, Jana; Sorge, Sebastian; Bujupi, Fatmire; Eichenlaub, Michael P.; Schulz, Natalie G.; Wittbrodt, Joachim; Lohmann, Ingrid: Hox function is required for the development and maintenance of the Drosophila feeding motor unit / Jana Friedrich, Sebastian Sorge, Fatmire Bujupi, Michael P. Eichenlaub, Natalie G. Schulz, Jochen Wi… , February 2, 2016. - S.11
  In: Cell reports, ISSN 2211-1247. 14(2016), Seite 1-11
  Online-Ressource, DOI: 10.1016/j.celrep.2015.12.077
• Aghaallaei, Nargessadat; Gruhl, Franziska; Lischik, Colin Q.; Wernet, Tobias; Weinhardt, Venera; Centanin, Lázaro; Loosli, Felix; Baumbach, Tilo; Wittbrodt, Joachim: Identification, visualization and clonal analysis of intestinal stem cells in fish / Narges Aghaallaei, Franziska Gruhl, Colin Q. Schaefer, Tobias Wernet, Venera Weinhardt, Lázaro Centa… , 2016. - S.11
  In: Development, ISSN 1477-9129. 143(2016), 19, Seite 3470-3480
  Online-Ressource, DOI: 10.1242/dev.134098
• Zhang, Ping; Wittbrodt, Joachim: Expression screening using a Medaka cDNA library identifies evolutionarily conserved regulators of the p53/Mdm2 pathway / Ping Zhang, Anne Sophie Kratz, Mohammed Salama, Seham Elabd, Thorsten Heinrich, Joachim Wittbrodt, C… . -
  London: BioMed Central, 2016. - 1 Online-Ressource (9 Seiten)
  Online-Ressource
• Alonso-Barba, Juan I.; Wittbrodt, Joachim; Mateo, Juan L.: MEPD : medaka expression pattern database, genes and more / Juan I. Alonso-Barba, Raza-Ur Rahman, Joachim Wittbrodt and Juan L. Mateo, 2016. - S.3
  In: Nucleic acids research, ISSN 1362-4962. 44(2016), D1, Seite D819-D821
  Online-Ressource, DOI: 10.1093/nar/gkv1029
• Gutiérrez Triana, José Arturo; Mateo, Juan L.; Ibberson, David; Ryu, Soojin; Wittbrodt, Joachim: iDamIDseq and iDEAR : an improved method and computational pipeline to profile chromatin-binding proteins / Jose Arturo Gutierrez-Triana, Juan L. Mateo, David Ibberson, Soojin Ryu and Joachim Wittbrodt, 6 September 2016. - S.7
  In: Development, ISSN 1477-9129. 143(2016), 22, Seite 4272-4278
  Online-Ressource, DOI: 10.1242/dev.139261
• Nicolás-Pérez, María; Kuchling, Franz; Letelier, Joaquín; Polvillo, Rocío; Wittbrodt, Joachim; Martínez-Morales, Juan R: Analysis of cellular behavior and cytoskeletal dynamics reveal a constriction mechanism driving optic cup morphogenesis / María Nicolás-Pérez, Franz Kuchling, Joaquín Letelier, Rocío Polvillo, Jochen Wittbrodt, Juan R Mart… , 31 October 2016. - S.24
  In: eLife, ISSN 2050-084X. 5(2016) Artikel-Nummer 15797, 24 Seiten
  Online-Ressource, DOI: 10.7554/eLife.15797
• Lust, Katharina; Sinn, Rebecca; Pérez Saturnino, Alicia; Centanin, Lázaro; Wittbrodt, Joachim: De novo neurogenesis by targeted expression of atoh7 to Müller glia cells / Katharina Lust, Rebecca Sinn, Alicia Pérez Saturnino, Lázaro Centanin and Joachim Wittbrodt, 1 June 2016. - S.10
  In: Development, ISSN 1477-9129. 143(2016), 11, Seite 1874-1883
  Online-Ressource, DOI: 10.1242/dev.135905
• Kromm, Dimitri; Thumberger, Thomas; Wittbrodt, Joachim: An eye on light-sheet microscopy / D. Kromm, T. Thumberger, J. Wittbrodt, 27 February 2016. - S.19
  In: Cellular biology / edited by H. William Detrich, III (Northeastern University Marine Science Center, Nahant, MA, United States), Monte Westerfield (University of Oregon, Eugene, OR, United States), Leonard I. Zon (Harvard University, Boston, MA, United States). (2016), Seite 105-123
  Online-Ressource, DOI: 10.1016/bs.mcb.2016.01.001
• "Implementation of X-ray hierarchical imaging for life sciences: application to functional genomics and regenerative biology" : final report / Institution: Dept. of Molecular Developmental Biology and Physiology, Centre for Organismal Studies,… . -
  Heidelberg: Dept. of Molecular Developmental Biology and Physiology, Centre for Organismal Studies, Heidelberg University, 08.08.2016. - 1 Online-Ressource (21 Seiten, 1,35 MB) : Illustrationen, Diagramme
  Online-Ressource, DOI: 10.2314/GBV:887686494

2015

• CCTop : an intuitive, flexible and reliable CRISPR/Cas9 target prediction tool / Manuel Stemmer; Thomas Thumberger; Maria del Sol Keyer; Joachim Wittbrodt; Juan L. Mateo, 2015. - S.11
  In: PLOS ONE, ISSN 1932-6203. 10(2015,4) Artikel-Nr. e0124633, 11 S.
  Online-Ressource, DOI: 10.1371/journal.pone.0124633
• Eye morphogenesis driven by epithelial flow into the optic cup facilitated by modulation of bone morphogenetic protein / Stephan Heermann, Lucas Schütz, Steffen Lemke, Kerstin Krieglstein, Joachim Wittbrodt, 2015. - S.17
  In: eLife, ISSN 2050-084X. 4(2015) Artikel-Nr. e05216, 17 S.
  Online-Ressource, DOI: 10.7554/eLife.05216
• Dolle, Dirk-Dominik; Mateo, Juan L.; Eichenlaub, Michael P.; Sinn, Rebecca; Reinhardt, Robert; Höckendorf, Burkhard; Inoue, Daigo; Centanin, Lázaro; Wittbrodt, Joachim: Handling permutation in sequence comparison: genome-wide enhancer prediction in vertebrates by a novel non-linear alignment scoring principle / Dirk Dolle, Juan L. Mateo, Michael P. Eichenlaub, Rebecca Sinn, Robert Reinhardt, Burkhard Höckend… , October 27, 2015. - S.25
  In: PLOS ONE, ISSN 1932-6203. 10(2015,10) Artikel-Nummer e0141487, 25 Seiten
  Online-Ressource, DOI: 10.1371/journal.pone.0141487
• Stemmer, Manuel; Schuhmacher, Laura-Nadine; Foulkes, Nicholas S.; Bertolucci, Cristiano; Wittbrodt, Joachim: Cavefish eye loss in response to an early block in retinal differentiation progression / Manuel Stemmer, Laura-Nadine Schuhmacher, Nicholas S. Foulkes, Cristiano Bertolucci, and Joachim Wit… , 2015. - S.10
  In: Development, ISSN 1477-9129. 142(2015), 4, Seite 743-752
  Online-Ressource, DOI: 10.1242/dev.114629
• Lust, Katharina; Wittbrodt, Joachim: Hold your breath! / Katharina Lust and Joachim Wittbrodt, December 16, 2015. - S.3
  In: eLife, ISSN 2050-084X. 4(2015) Artikel-Nr. e05216, 3 Seiten
  Online-Ressource, DOI: 10.7554/eLife.12523
• Zhang, Ping; Yan, Hualong; Wittbrodt, Joachim: TRIM25 has a dual function in the p53/Mdm2 circuit / P. Zhang, S. Elabd, S. Hammer, V. Solozobova, H. Yan, F. Bartel, S. Inoue, T. Henrich, J. Wittbrodt,… , 2 March 2015. - S.10
  In: Oncogene, ISSN 1476-5594. 34(2015), 46, Seite 5729-5738
  Online-Ressource, DOI: 10.1038/onc.2015.21
• Beccari, Leonardo; Souren, Marcel; Wittbrodt, Beate; Wittbrodt, Joachim: A trans-regulatory code for the forebrain expression of Six3.2 in the medaka fish / Leonardo Beccari, Raquel Marco-Ferreres, Noemi Tabanera, Anna Manfredi, Marcel Souren, Beate Wittbro… , September 16, 2015. - S.16
  In: The journal of biological chemistry, ISSN 1083-351X. 290(2015), 45, Seite 26927-26942
  Online-Ressource, DOI: 10.1074/jbc.M115.681254
• Zhang, Ping; Wittbrodt, Joachim: Expression screening using a Medaka cDNA library identifies evolutionarily conserved regulators of the p53/Mdm2 pathway / Ping Zhang, Anne Sophie Kratz, Mohammed Salama, Seham Elabd, Thorsten Heinrich, Joachim Wittbrodt, C… , 8 October 2015. - S.9
  In: BMC biotechnology, ISSN 1472-6750. 15(2015,1), Artikel-Nr. 92, 9 Seiten
  Online-Ressource, DOI: 10.1186/s12896-015-0208-y
• Bajoghli, Baubak; Inoue, Daigo; Aghaallaei, Nargessadat; Thumberger, Thomas; Wittbrodt, Joachim: Noninvasive in toto imaging of the thymus reveals heterogeneous migratory behavior of developing T cells / Baubak Bajoghli, Paola Kuri, Daigo Inoue, Narges Aghaallaei, Marleen Hanelt, Thomas Thumberger, Matt… , 17 July 2015. - S.10
  In: The journal of immunology, ISSN 1550-6606. 195(2015), 5, Seite 2177-2186
  Online-Ressource, DOI: 10.4049/jimmunol.1500361
• Auer, Thomas; Wittbrodt, Joachim: Deletion of a kinesin I motor unmasks a mechanism of homeostatic branching control by neurotrophin-3 / Thomas O. Auer, Tong Xiao, Valerie Bercier, Christoph Gebhardt, Karine Duroure, Jean-Paul Concordet,… , June 15, 2015. - S.26
  In: eLife, ISSN 2050-084X. 4(2015) Artikel-Nr. e05061, 26 Seiten
  Online-Ressource, DOI: 10.7554/eLife.05061
• Reinhardt, Robert; Centanin, Lázaro; Tavhelidse-Suck, Tinatini; Inoue, Daigo; Wittbrodt, Beate; Wittbrodt, Joachim: Sox2, Tlx, Gli3, and Her9 converge on Rx2 to define retinal stem cells in vivo / Robert Reinhardt, Lázaro Centanin, Tinatini Tavhelidse, Daigo Inoue, Beate Wittbrodt, Jean-Paul Conc… , April 23, 2015. - S.17
  In: The EMBO journal, ISSN 1460-2075. 34(2015), 11, Seite 1572-1588
  Online-Ressource, DOI: 10.15252/embj.201490706
• Kirchmaier, Stephan; Wittbrodt, Joachim: The genomic and genetic toolbox of the teleost medaka (Oryzias latipes) / Stephan Kirchmaier, Kiyoshi Naruse, Joachim Wittbrodt, and Felix Loosli, April 2015. - S.14
  In: Genetics, ISSN 1943-2631. 199(2015), 4, Seite 905-918
  Online-Ressource, DOI: 10.1534/genetics.114.173849
• Mateo, Juan L.; Ettwiller, Laurence; Wittbrodt, Joachim: Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal / Juan L. Mateo, Debbie L. C. van den Berg, Maximilian Haeussler, Daniela Drechsel, Zachary B. Gaber, … , 2015. - S.16
  In: Genome research, ISSN 1549-5469. 25(2015), 1, Seite 41-56
  Online-Ressource, DOI: 10.1101/gr.173435.114
• Wittbrodt, Joachim: Stammzellforschung anhand von Fischaugen / Joachim Wittbrodt. -
  Heidelberg: Universitätsbibliothek Heidelberg, 2015. - Online-Ressource
  (Campus-Report bei Uni-Radio Baden)
  Online-Ressource

2014

• Chen, Qing; Ramialison, Mirana; Wittbrodt, Joachim: Tyrosine phosphorylation of LRP6 by Src and Fer inhibits Wnt/β‐catenin signalling / Qing Chen, Yi Su, Janine Wesslowski, Anja I. Hagemann, Mirana Ramialison, Joachim Wittbrodt, Steffen… , November 12, 2014. - S.14
  In: EMBO reports, ISSN 1469-3178. 15(2014), 12, Seite 1254-1267
  Online-Ressource, DOI: 10.15252/embr.201439644
• Crespo, Carolina Lage; Wittbrodt, Joachim: The PAR complex controls the spatiotemporal dynamics of F-actin and the MTOC in directionally migrating leukocytes / Carolina Lage Crespo, Claudio Vernieri, Philipp J. Keller, Massimiliano Garrè, Jeffrey R. Bender, Jo… , 2014. - S.15
  Online-Ressource, DOI: 10.1242/jcs.146217
• Centanin, Lázaro; Ander, Janina-Jacqueline; Höckendorf, Burkhard; Lust, Katharina; Kellner, Tanja; Krämer, Isabel; Urbany, Cedric; Hasel, Eva Mareike; Wittbrodt, Joachim: Exclusive multipotency and preferential asymmetric divisions in post-embryonic neural stem cells of the fish retina / Lázaro Centanin, Janina-J. Ander, Burkhard Hoeckendorf, Katharina Lust, Tanja Kellner, Isabel Kraeme… , 2014. - S.11
  In: Development, ISSN 1477-9129. 141(2014), 18, Seite 3472-3482
  Online-Ressource, DOI: 10.1242/dev.109892
• Sinn, Rebecca; Heermann, Stephan; Wittbrodt, Joachim: Differential responsiveness of distinct retinal domains to Atoh7 / Rebecca Sinn, Ravindra Peravali, Stephan Heermann, Joachim Wittbrodt, 21 August 2014. - S.12
  In: Mechanisms of development, ISSN 1872-6356. 133(2014), Seite 218-229
  Online-Ressource, DOI: 10.1016/j.mod.2014.08.002
• Tena, Juan J.; Wittbrodt, Joachim: Comparative epigenomics in distantly related teleost species identifies conserved cis-regulatory nodes active during the vertebrate phylotypic period / Juan J. Tena, Cristina González-Aguilera, Ana Fernández-Miñán, Javier Vázquez-Marín, Helena Parra-Ac… , April 7, 2014. - S.11
  In: Genome research, ISSN 1549-5469. 24(2014), 7, Seite 1075-1085
  Online-Ressource, DOI: 10.1101/gr.163915.113
• Mazaheri, Fargol; Haas, Petra; Wittbrodt, Joachim: Distinct roles for BAI1 and TIM-4 in the engulfment of dying neurons by microglia / Fargol Mazaheri, Oksana Breus, Sevi Durdu, Petra Haas, Jochen Wittbrodt, Darren Gilmour & Francesca … , 5 June 2014. - S.11
  In: Nature Communications, ISSN 2041-1723. 5(2014) Artikel-Nr. 4046, 11 Seiten
  Online-Ressource, DOI: 10.1038/ncomms5046
• Spivakov, Mikhail; Auer, Thomas; Dolle, Dirk-Dominik; Wittbrodt, Joachim: Genomic and phenotypic characterization of a wild medaka population : towards the establishment of an isogenic population genetic resource in fish / Mikhail Spivakov, Thomas O. Auer, Ravindra Peravali, Ian Dunham, Dirk Dolle, Asao Fujiyama, Atsushi … , 2014. - S.13
  In: G3: Genes, genomes, genetics, ISSN 2160-1836. 4(2014), 3, Seite 433-445
  Online-Ressource, DOI: 10.1534/g3.113.008722
• Centanin, Lázaro; Wittbrodt, Joachim: Retinal neurogenesis / Lázaro Centanin and Joachim Wittbrodt, 2014. - S.4
  In: Development, ISSN 1477-9129. 141(2014), 2, Seite 241-244
  Online-Ressource, DOI: 10.1242/dev.083642

2013

• Tumor angiogenesis is caused by single melanoma cells in a manner dependent on reactive oxygen species and NF-kappa B / Maximilian K. Schaafhausen, Wan-Jen Yang, Lazaro Centanin, Joachim Wittbrodt, Anja Bosserhoff, Andre… , 2013. - S.11
  In: Journal of cell science, ISSN 1477-9137. 126(2013), 17, Seite 3862-3872
  Online-Ressource, DOI: 10.1242/jcs.125021
• The centriolar satellite protein SSX2IP promotes centrosome maturation / Felix Bärenz, Daigo Inoue, Hideki Yokoyama, Justus Tegha-Dunghu, Stephanie Freiss, Stefanie Draeger,… , 2013. - S.15
  In: The journal of cell biology, ISSN 1540-8140. 202(2013), 1, Seite 81-95
  Online-Ressource, DOI: 10.1083/jcb.201302122
• Wittbrodt, Joachim: Am Anfang war die Zelle : Chaos als Ordnungsprinzip / Joachim Wittbrodt, 2013. - S.8
  In: Ruperto Carola. 3(2013), Seite 102-109
  Online-Ressource
• Loosli, Claudia; Wittbrodt, Joachim: The medaka mutation tintachina sheds light on the evolution of V-ATPase B subunits in vertebrates / Claudia Müller, Ignacio Maeso, Joachim Wittbrodt & Juan R. Martínez-Morales, 14 November 2013. - S.7
  In: Scientific reports, ISSN 2045-2322. 3(2013) Artikel-Nr. 3217, 7 Seiten
  Online-Ressource, DOI: 10.1038/srep03217
• Kirchmaier, Stephan; Höckendorf, Burkhard; Möller, Eva Katharina; Bornhorst, Dorothee; Wittbrodt, Joachim: Efficient site-specific transgenesis and enhancer activity tests in medaka using PhiC31 integrase / Stephan Kirchmaier, Burkhard Höckendorf, Eva Katharina Möller, Dorothee Bornhorst, Francois Spitz an… , 2013. - S.9
  In: Development, ISSN 1477-9129. 140(2013), 20, Seite 4287-4295
  Online-Ressource, DOI: 10.1242/dev.096081
• Martynoga, Ben; Mateo, Juan L.; Wittbrodt, Joachim; Ettwiller, Laurence: Epigenomic enhancer annotation reveals a key role for NFIX in neural stem cell quiescence / Ben Martynoga, Juan L. Mateo, Bo Zhou, Jimena Andersen, Angeliki Achimastou, Noelia Urbán, Debbie va… , 2013. - S.8
  In: Genes & development, ISSN 1549-5477. 27(2013), 16, Seite 1769-1786
  Online-Ressource, DOI: 10.1101/gad.216804.113
• Herder, Cathrin; Loosli, Claudia; Wittbrodt, Joachim: ArhGEF18 regulates RhoA-Rock2 signaling to maintain neuro-epithelial apico-basal polarity and proliferation / Cathrin Herder, Jakub M. Swiercz, Claudia Müller, Ravindra Peravali, Rebecca Quiring, Stefan Offerma… , 2013. - S.11
  In: Development, ISSN 1477-9129. 140(2013), 13, Seite 2787-2797
  Online-Ressource, DOI: 10.1242/dev.096487
• Volbehr, Ute; Wittbrodt, Joachim: MoD special issue on molecular and cellular bases of neural development / Ute Volbehr, Joachim Wittbrodt, 1 June 2013. - S.1
  In: Mechanisms of development, ISSN 1872-6356. 130(2013), 6/8, Seite 323
  Online-Ressource, DOI: 10.1016/j.mod.2013.05.003
• Sinn, Rebecca; Wittbrodt, Joachim: An eye on eye development / Rebecca Sinn, Joachim Wittbrodt, 15 May 2013. - S.12
  In: Mechanisms of development, ISSN 1872-6356. 130(2013), 6/8, Seite 347-358
  Online-Ressource, DOI: 10.1016/j.mod.2013.05.001
• Kirchmaier, Stephan; Lust, Katharina; Wittbrodt, Joachim: Golden GATEway cloning : a combinatorial approach to generate fusion and recombination constructs / Stephan Kirchmaier, Katharina Lust, Joachim Wittbrodt, October 7, 2013. - S.9
  In: PLOS ONE, ISSN 1932-6203. 8(2013,10) Artikel-Nummer e76117, 9 Seiten
  Online-Ressource, DOI: 10.1371/journal.pone.0076117

2012

• Similarity analysis of cell movements in video microscopy / J. Fangerau, B. Höckendorf, J. Wittbrodt, H. Leitte, 2012. - S.8
  In: Biological Data Visualization (BioVis), 2012 IEEE Symposium on. (2012), Seite 69-76
  Online-Ressource, DOI: 10.1109/BioVis.2012.6378595
• A discrete chain graph model for 3d+t cell tracking with high misdetection robustness / Bernhard X. Kausler, Martin Schiegg, Bjoern Andres, Martin Lindner, Ullrich Koethe, Heike Leitte, Jo… , 2012. - S.14
  In: Computer Vision - ECCV 2012. (2012), Seite 144-157
  Online-Ressource, DOI: 10.1007/978-3-642-33712-3_11
• Dunham, Ian; Auer, Thomas; Centanin, Lázaro; Eichenlaub, Michael P.; Gruhl, Franziska; Heermann, Stephan; Höckendorf, Burkhard; Inoue, Daigo; Kellner, Tanja; Kirchmaier, Stephan; Loosli, Claudia; Reinhardt, Robert; Schertel, Lea; Schneider-Boutros, Stephanie; Sinn, Rebecca; Wittbrodt, Beate; Wittbrodt, Joachim: An integrated encyclopedia of DNA elements in the human genome / the ENCODE Project Consortium, 05 September 2012. - S.18
  In: Nature, ISSN 1476-4687. 489(2012), 7414, Seite 57-74
  Online-Ressource, DOI: 10.1038/nature11247
• Höckendorf, Burkhard; Thumberger, Thomas; Wittbrodt, Joachim: Quantitative analysis of embryogenesis : a perspective for light sheet microscopy / Burkhard Höckendorf, Thomas Thumberger, and Joachim Wittbrodt, December 11, 2012. - S.10
  In: Developmental cell, ISSN 1878-1551. 23(2012), 6, Seite 1111-1120
  Online-Ressource, DOI: 10.1016/j.devcel.2012.10.008
• Alten, Leonie; Eichenlaub, Michael P.; Wittbrodt, Beate; Wittbrodt, Joachim: A novel mammal-specific three partite enhancer element regulates node and notochord-specific noto expression / Leonie Alten, Karin Schuster-Gossler, Michael P. Eichenlaub, Beate Wittbrodt, Joachim Wittbrodt, Ach… , October 22, 2012. - S.11
  In: PLOS ONE, ISSN 1932-6203. 7(2012,10) Artikel-Nr. e47785, 11 Seiten
  Online-Ressource, DOI: 10.1371/journal.pone.0047785
• Bogdanović, Ozren; Wittbrodt, Joachim: Numb/Numbl-Opo antagonism controls retinal epithelium morphogenesis by regulating integrin endocytosis / Ozren Bogdanović, Mariana Delfino-Machín, María Nicolás-Pérez, María P. Gavilán, Inês Gago-Rodrigues… , October 4, 2012. - S.14
  In: Developmental cell, ISSN 1878-1551. 23(2012), 4, Seite 782-795
  Online-Ressource, DOI: 10.1016/j.devcel.2012.09.004
• Schulz, Sarah; Chachami, Georgia; Winter, Ulrike; Stankovic-Valentin, Nicolas; Haas, Petra; Wittbrodt, Joachim; Meulmeester, Erik; Melchior, Frauke: Ubiquitin‐specific protease‐like 1 (USPL1) is a SUMO isopeptidase with essential, non‐catalytic functions / Sarah Schulz, Georgia Chachami, Lukasz Kozaczkiewicz, Ulrike Winter, Nicolas Stankovic‐Valentin, Pet… , 10 August 2012. - S.9
  In: EMBO reports, ISSN 1469-3178. 13(2012), 10, Seite 930-938
  Online-Ressource, DOI: 10.1038/embor.2012.125
• Harden, Maegan V.; Ramialison, Mirana; Wittbrodt, Joachim: Close association of olfactory placode precursors and cranial neural crest cells does not predestine cell mixing / Maegan V. Harden, Luisa Pereiro, Mirana Ramialison, Jochen Wittbrodt, Megana K. Prasad, Andrew S. Mc… , 22 May 2012. - S.12
  In: Developmental dynamics, ISSN 1097-0177. 241(2012), 7, Seite 1143-1154
  Online-Ressource, DOI: 10.1002/dvdy.23797
• Ramialison, Mirana; Reinhardt, Robert; Wittbrodt, Beate; Kellner, Tanja; Lowy, Camille; Wittbrodt, Joachim: Cis-regulatory properties of medaka synexpression groups / Mirana Ramialison, Robert Reinhardt, Thorsten Henrich, Beate Wittbrodt, Tanja Kellner, Camille M. Lo… , 2012. - S.12
  In: Development, ISSN 1477-9129. 139(2012), 5, Seite 917-928
  Online-Ressource, DOI: 10.1242/dev.071803
• Wittbrodt, Joachim; Hell, Rüdiger; Lohmann, Jan U.; Holstein, Thomas W.: Centre for Organismal Studies (COS) Heidelberg / Joachim Wittbrodt, Rüdiger Hell, Jan Lohmann, and Thomas W. Holstein, 2012. - S.2
  In: Wissenschaftsatlas of Heidelberg University. (2012), Seite 228-229

2011

• Centanin, Lázaro; Höckendorf, Burkhard; Wittbrodt, Joachim: Fate restriction and multipotency in retinal stem cells / Lázaro Centanin, Burkhard Hoeckendorf, and Joachim Wittbrodt, December 1, 2011. - S.10
  In: Cell stem cell, ISSN 1875-9777. 9(2011), 6, Seite 553-562
  Online-Ressource, DOI: 10.1016/j.stem.2011.11.004
• Wittbrodt, Joachim; Hell, Rüdiger; Lohmann, Jan U.; Holstein, Thomas W.: Centre for Organismal Studies (COS) Heidelberg / Joachim Wittbrodt, Rüdiger Hell, Jan Lohmann und Thomas W. Holstein, 2011. - S.2
  In: Wissenschaftsatlas der Universität Heidelberg. (2011), Seite 228-229
• Inoue, Daigo; Wittbrodt, Joachim: One for all : a highly efficient and versatile method for fluorescent immunostaining in fish embryos / Daigo Inoue, Joachim Wittbrodt, May 13, 2011. - S.7
  In: PLOS ONE, ISSN 1932-6203. 6(2011,5) Artikel-Nummer e19713, 7 Seiten
  Online-Ressource, DOI: 10.1371/journal.pone.0019713
• Mongin, Emmanuel; Auer, Thomas; Gruhl, Franziska; Wittbrodt, Joachim; Ettwiller, Laurence: Combining computational prediction of cis-regulatory elements with a new enhancer assay to efficiently label neuronal structures in the Medaka fish / Emmanuel Mongin, Thomas O. Auer, Franck Bourrat, Franziska Gruhl, Ken Dewar, Mathieu Blanchette, Joa… , May 27, 2011
  In: PLOS ONE, ISSN 1932-6203. 6(2011,5) Artikel-Nummer e0019747, 10 Seiten
  Online-Ressource, DOI: 10.1371/journal.pone.0019747
• Keller, Philipp J.; Schmidt, Annette D.; Wittbrodt, Joachim; Stelzer, Ernst H. K.: Digital scanned laser light-sheet fluorescence microscopy (DSLM) of zebrafish and drosophila embryonic development / Philipp J. Keller, Annette D. Schmidt, Jochen Wittbrodt, Ernst H.K. Stelzer, 2011. - S.?
  In: Cold Spring Harbor protocols, ISSN 1559-6095. (2011), 10, Seite ?
  Online-Ressource, DOI: 10.1101/pdb.prot065839
• Maurya, Ashish K.; Souren, Marcel; Wittbrodt, Joachim: Integration of hedgehog and BMP signalling by the engrailed2a gene in the zebrafish myotome / Ashish K. Maurya, Haihan Tan, Marcel Souren, Xingang Wang, Joachim Wittbrodt and Philip W. Ingham, [2011]. - S.11
  In: Development, ISSN 1477-9129. 138(2011), 4, Seite 755-765
  Online-Ressource, DOI: 10.1242/dev.062521

2010

• Hochleistungsfähiges Mikroskopiesystem am Institut für Zoologie / Campus-TV. Joachim Wittbrodt. -
  [Heidelberg] ; Heidelberg: Institut für Zoologie ; Universitätsbibliothek der Universität Heidelberg, 2010. - Online-Ressource
  Online-Ressource
• Haudry, Yannick; Ramialison, Mirana; Wittbrodt, Joachim; Ettwiller, Laurence: Using Trawler_standalone to discover overrepresented motifs in DNA and RNA sequences derived from various experiments including chromatin immunoprecipitation / Yannick Haudry, Mirana Ramialison, Benedict Paten, Joachim Wittbrodt, Laurence Ettwiller, 4 February 2010. - S.12
  In: Nature protocols, ISSN 1750-2799. 5(2010), 2, Seite 323-334
  Online-Ressource, DOI: 10.1038/nprot.2009.158
• Haudry, Yannick; Ramialison, Mirana; Wittbrodt, Joachim; Ettwiller, Laurence: Using Trawler_standalone to discover overrepresented motifs in DNA and RNA sequences derived from various experiments including chromatin immunoprecipitation / Yannick Haudry, Mirana Ramialison, Benedict Paten, Joachim Wittbrodt, Laurence Ettwiller, 4 February 2010. - S.12
  In: Nature protocols, ISSN 1754-2189. 5(2010), 2, Seite 323-334
• Browne, Katherine E.; Wittbrodt, Joachim: Nlcam modulates midline convergence during anterior neural plate morphogenesis / Katherine E. Brown, Philipp J. Keller, Mirana Ramialison, Martina Rembold, Ernst H.K. Stelzer, Felix… , 2010. - S.12
  In: Developmental biology, ISSN 1095-564X. 339(2010), 1, Seite 14-25
  Online-Ressource, DOI: 10.1016/j.ydbio.2009.12.003
• Keller, Philipp J.; Schmidt, Annette D.; Wittbrodt, Joachim; Stelzer, Ernst H. K.: Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy / Philipp J. Keller, Annette D. Schmidt, Anthony Santella, Khaled Khairy, Zhirong Bao, Joachim Wittbro… , 04 July 2010. - S.6
  In: Nature methods, ISSN 1548-7105. 7(2010), 8, Seite 637-642
  Online-Ressource, DOI: 10.1038/nmeth.1476

2008

• Ramialison, Mirana; Aghaallaei, Nargessadat; Ettwiller, Laurence; Wittbrodt, Beate; Wittbrodt, Joachim: Rapid identification of PAX2/5/8 direct downstream targets in the otic vesicle by combinatorial use of bioinformatics tools / Mirana Ramialison, Baubak Bajoghli, Narges Aghaallaei, Laurence Ettwiller, Sylvain Gaudan, Beate Wit… , 1 October 2008
  In: Genome biology, ISSN 1474-760X. 9(2008) Artikelnummer R145, 11 Seiten
  Online-Ressource, DOI: 10.1186/gb-2008-9-10-r145
• Ettwiller, Laurence; Wittbrodt, Joachim: Analysis of mammalian gene batteries reveals both stable ancestral cores and highly dynamic regulatory sequences / Laurence Ettwiller, Aidan Budd, François Spitz, Joachim Wittbrodt, 16 December 2008. - S.10
  In: Genome biology, ISSN 1474-760X. 9(2008) Artikelnummer R172, 10 Seiten
  Online-Ressource, DOI: 10.1186/gb-2008-9-12-r172
• Haudry, Yannick; Bork, Peer; Wittbrodt, Joachim: 4D Xpress : a database for cross-species expression pattern comparisons / Yannick Haudry, Hugo Berube, Ivica Letunic, Paul-Daniel Weeber, Julien Gagneur, Charles Girardot, Mi… , 2008. - S.7
  In: Nucleic acids research, ISSN 1362-4962. 36(2008), suppl_1, Seite D847-D853
  Online-Ressource, DOI: 10.1093/nar/gkm797

2007

• Ettwiller, Laurence; Ramialison, Mirana; Wittbrodt, Joachim: Trawler : de novo regulatory motif discovery pipeline for chromatin immunoprecipitation / Laurence Ettwiller, Benedict Paten, Mirana Ramialison, Ewan Birney, Joachim Wittbrodt, 24 June 2007. - S.3
  In: Nature methods, ISSN 1548-7105. 4(2007), 7, Seite 563-565
  Online-Ressource, DOI: 10.1038/nmeth1061
• Ettwiller, Laurence; Ramialison, Mirana; Wittbrodt, Joachim: Trawler : de novo regulatory motif discovery pipeline for chromatin immunoprecipitation / Laurence Ettwiller, Benedict Paten, Mirana Ramialison, Ewan Birney, Joachim Wittbrodt, 24 June 2007. - S.3
  In: Nature methods, ISSN 1548-7091. 4(2007), 7, Seite 563-565
• Del Bene, Filippo; Ettwiller, Laurence; Wittbrodt, Joachim: In vivo validation of a computationally predicted conserved Ath5 Target Gene Set / Filippo Del Bene, Laurence Ettwiller, Dorota Skowronska-Krawczyk, Herwig Baier, Jean-Marc Matter, Ew… , September 21, 2007. - S.10
  In: PLoS Genetics, ISSN 1553-7404. 3(2007) Artikelnummer e159, 10 Seiten
  Online-Ressource, DOI: 10.1371/journal.pgen.0030159
• Steinmetz, Patrick R. H.; Wittbrodt, Joachim; Arendt, Detlev: Polychaete trunk neuroectoderm converges and extends by mediolateral cell intercalation / Patrick R.H. Steinmetz, Fabiola Zelada-Gonzáles, Carola Burgtorf, Joachim Wittbrodt, and Detlev Aren… , 2007. - S.6
  In: Proceedings of the National Academy of Sciences of the United States of America, ISSN 1091-6490. 104(2007), 8, Seite 2727-2732
  Online-Ressource, DOI: 10.1073/pnas.0606589104

2005

• Ettwiller, Laurence; Wittbrodt, Joachim: The discovery, positioning and verification of a set of transcription-associated motifs in vertebrates / Laurence Ettwiller, Benedict Paten, Marcel Souren, Felix Loosli, Jochen Wittbrodt and Ewan Birney, 2 December 2005. - S.14
  In: Genome biology, ISSN 1474-760X. 6(2005) Artikel-Nummer R104, 14 Seiten
  Online-Ressource, DOI: 10.1186/gb-2005-6-12-r104
• Fritzsch, Bernd; Wittbrodt, Joachim; Arendt, Detlev: Ancestry of photic and mechanic sensation? / Bernd Fritzsch, Joram Piatigorsky, Kristin Tessmar-Raible, Gáspár Jékely, Guy Keren, Florian Raible,… , [2005]. - S.2
  In: Science, ISSN 1095-9203. 308(2005), 5725, Seite 1113-1114
  Online-Ressource, DOI: 10.1126/science.308.5725.1113

2004

• Poggi, Lucia; Wittbrodt, Joachim: The homeobox gene Xbh1 cooperates with proneural genes to specify ganglion cell fate within the Xenopus neural retina / Lucia Poggi, Teresa Vottari, Giuseppina Barsacchi, Joachim Wittbrodt, Robert Vignali, May 5, 2004. - S.11
  In: Development, ISSN 1477-9129. 131(2004), 10, Seite 2305-2315
  Online-Ressource, DOI: 10.1242/dev.01099
• Arendt, Detlev; Wittbrodt, Joachim: Ciliary photoreceptors with a vertebrate-type opsin in an invertebrate brain / Detlev Arendt, Kristin Tessmar-Raible, Heidi Snyman, Adriaan W. Dorresteijn, Joachim Wittbrodt, September 7, 2004. - S.3
  In: Science, ISSN 1095-9203. 306(2004), 5697, Seite 869-871
  Online-Ressource, DOI: 10.1126/science.1099955

2002

• Wittbrodt, Joachim; Shima, Akihiro; Schartl, Manfred: Medaka : a model organism from the far east / Joachim Wittbrodt, Akihiro Shima, Manfred Schartl, 2002. - S.12
  In: Nature reviews, ISSN 1471-0064. 3(2002), 1, Seite 53-64
  Online-Ressource, DOI: 10.1038/nrg704

2001

• Arendt, Detlev; Technau, Ulrich; Wittbrodt, Joachim: Evolution of the bilaterian larval foregut / Detlev Arendt, Ulrich Technau, Joachim Wittbrodt, 4 January 2001. - S.5
  In: Nature, ISSN 1476-4687. 409(2001), 6816, Seite 81-85
  Online-Ressource, DOI: 10.1038/35051075
• Arendt, Detlev; Wittbrodt, Joachim: Reconstructing the eyes of Urbilateria / Detlev Arendt, Joachim Wittbrodt, 29 October 2001. - S.19
  In: Philosophical transactions, ISSN 1471-2970. 356(2001), 1414, Seite 1545-1563
  Online-Ressource, DOI: 10.1098/rstb.2001.0971

1989

• Wittbrodt, Joachim: Novel putative receptor tyrosine kinase encoded by the melanoma-inducing Tu locus in Xiphophorus / Joachim Wittbrodt, Dieter Adam, Barbara Malitschek, Winfried Mäueler, Friedrich Raulf, Agnes Telling… , 1989. - S.7
  In: Nature, ISSN 1476-4687. 341(1989), 6241, Seite 415-421
  Online-Ressource, DOI: 10.1038/341415a0